| Place | Team | GP | Won | Draw | Lost | GF | GA | GD | Points |
|---|---|---|---|---|---|---|---|---|---|
| 1 | Tartu JK Welco | 35 | 24 | 5 | 6 | 101 | 45 | 56 | 77 |
| 2 | Viimsi | 35 | 18 | 6 | 11 | 65 | 35 | 30 | 60 |
| 3 | FCI Levadia II | 35 | 18 | 3 | 14 | 71 | 58 | 13 | 57 |
| 4 | Flora Tallinn U21 | 35 | 16 | 7 | 12 | 81 | 60 | 21 | 55 |
| 5 | FC Elva | 35 | 15 | 9 | 11 | 53 | 51 | 2 | 54 |
| 6 | Talinna Kalev | 35 | 12 | 8 | 15 | 62 | 63 | -1 | 44 |
| 7 | Nomme United U21 | 35 | 12 | 6 | 17 | 60 | 70 | -10 | 42 |
| 8 | Maardu Linnameeskond | 35 | 12 | 5 | 18 | 45 | 79 | -34 | 41 |
| 9 | FC Tallinn | 35 | 10 | 8 | 17 | 43 | 78 | -35 | 38 |
| 10 | Nomme Kalju U21 | 35 | 7 | 5 | 23 | 43 | 85 | -42 | 26 |